Pseudomonas aeruginosa PAO1, PA1659 (hsiF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1659
Name
hsiF2
Synonym: tssE2
Replicon chromosome
Genomic location 1807241 - 1807648 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250350.1
GI 15596856
Affymetrix PA1659_at
Entrez 880734
GenBank AAG05048.1
INSDC AAG05048.1
NCBI Locus Tag PA1659
protein_id(GenBank) gb|AAG05048.1|AE004593_10|gnl|PseudoCAP|PA1659
TIGR NTL03PA01660
UniParc UPI00000C5431
UniProtKB Acc Q9I366
UniProtKB ID Q9I366_PSEAE
UniRef100 UniRef100_Q9I366
UniRef50 UniRef50_Q9I366
UniRef90 UniRef90_Q9I366

Product

Feature Type CDS
Coding Frame 1
Product Name
HsiF2
Product Name Confidence: Class 1
CommentHcp Secretion Island-II-encoded type VI secretion system (H2-T6SS)
Evidence for Translation
Charge (pH 7) -2.56
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 14.7
Isoelectric Point (pI) 5.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database PseudoCAP
Category Hcp secretion island-2 encoded type VI secretion system (H2-T6SS)
Evidence ECO:0000317
genomic context evidence used in manual assertion
Host Organism Homo sapiens
Notes H2-T6SS rendered inactive via clpV2 deletion.
Reference 22665491

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 48 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000086 (851 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1659
Search term: hsiF2
Search term: HsiF2

References

PubMed ID: 21873404
PubMed ID: 28673999