Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2013
|
Name |
liuC
Synonym: gnyH Synonym: menB |
Replicon | chromosome |
Genomic location | 2202649 - 2203446 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_250703.1 |
GI | 15597209 |
Affymetrix | PA2013_at |
DNASU | PaCD00006899 |
Entrez | 879128 |
GenBank | AAG05401.1 |
INSDC | AAG05401.1 |
NCBI Locus Tag | PA2013 |
protein_id(GenBank) | gb|AAG05401.1|AE004627_9|gnl|PseudoCAP|PA2013 |
TIGR | NTL03PA02013 |
UniParc | UPI00000C5559 |
UniProtKB Acc | Q9I298 |
UniProtKB ID | Q9I298_PSEAE |
UniRef100 | UniRef100_W0YT12 |
UniRef50 | UniRef50_Q4K9P5 |
UniRef90 | UniRef90_A0A022P1B4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative 3-methylglutaconyl-CoA hydratase
|
Synonyms |
gamma-carboxygeranoyl-CoA hydratase, GnyH |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -4.46 |
Kyte-Doolittle Hydrophobicity Value | -0.033 |
Molecular Weight (kDa) | 28.9 |
Isoelectric Point (pI) | 5.19 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 492 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003426 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2013
Search term: liuC
Search term: putative 3-methylglutaconyl-CoA hydratase
|
Ensembl
110, assembly
GRCh38.p14
|
enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]
E-value:
1.7e-14
Percent Identity:
29.2
|
Ensembl
110, assembly
GRCh38.p14
|
enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]
E-value:
1.7e-14
Percent Identity:
29.2
|
The gnyRDBHAL cluster is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa.
Díaz-Pérez AL, Zavala-Hernández AN, Cervantes C, Campos-García J
Appl Environ Microbiol 2004 Sep;70(9):5102-10
PubMed ID: 15345388
|
Identification of genes and proteins necessary for catabolism of acyclic terpenes and leucine/isovalerate in Pseudomonas aeruginosa.
Förster-Fromme K, Höschle B, Mack C, Bott M, Armbruster W, Jendrossek D
Appl Environ Microbiol 2006 Jul;72(7):4819-28
PubMed ID: 16820476
|
A bacterial homolog to the mitochondrial enoyl-CoA hydratase.
Beckman DL, Kranz RG
Gene 1991 Oct 30;107(1):171-2
PubMed ID: 1743516
|
Menaquinone (vitamin K2) biosynthesis: nucleotide sequence and expression of the menB gene from Escherichia coli.
Sharma V, Suvarna K, Meganathan R, Hudspeth ME
J Bacteriol 1992 Aug;174(15):5057-62
PubMed ID: 1629162
|