Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2016
|
Name |
liuR
Synonym: gnyR |
Replicon | chromosome |
Genomic location | 2206402 - 2206806 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_250706.1 |
GI | 15597212 |
Affymetrix | PA2016_at |
DNASU | PaCD00006901 |
Entrez | 878723 |
GenBank | AAG05404.1 |
INSDC | AAG05404.1 |
NCBI Locus Tag | PA2016 |
protein_id(GenBank) | gb|AAG05404.1|AE004628_2|gnl|PseudoCAP|PA2016 |
TIGR | NTL03PA02016 |
UniParc | UPI00000C555C |
UniProtKB Acc | Q9I295 |
UniProtKB ID | Q9I295_PSEAE |
UniRef100 | UniRef100_W0YPW1 |
UniRef50 | UniRef50_B7VA89 |
UniRef90 | UniRef90_B7VA89 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
regulator of liu genes
|
Synonyms |
Regulatory gene of gnyRDBHAL cluster, GnyR GnyR |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.82 |
Kyte-Doolittle Hydrophobicity Value | -0.647 |
Molecular Weight (kDa) | 15.6 |
Isoelectric Point (pI) | 5.37 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003423 (524 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2016
Search term: liuR
Search term: regulator of liu genes
|
The gnyRDBHAL cluster is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa.
Díaz-Pérez AL, Zavala-Hernández AN, Cervantes C, Campos-García J
Appl Environ Microbiol 2004 Sep;70(9):5102-10
PubMed ID: 15345388
|
Identification of genes and proteins necessary for catabolism of acyclic terpenes and leucine/isovalerate in Pseudomonas aeruginosa.
Förster-Fromme K, Höschle B, Mack C, Bott M, Armbruster W, Jendrossek D
Appl Environ Microbiol 2006 Jul;72(7):4819-28
PubMed ID: 16820476
|