Pseudomonas aeruginosa PAO1, PA3488 (tli5)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA3488
Name
tli5
Synonym: tli5a
Replicon chromosome
Genomic location 3905959 - 3907089 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252178
GI 15598684
Affymetrix PA3488_at
Entrez 880041
GenBank AAG06876.1
NCBI Locus Tag PA3488
protein_id(GenBank) gb|AAG06876.1|AE004770_1|gnl|PseudoCAP|PA3488
TIGR NTL03PA03488
UniProtKB Acc Q9HYC1
UniProtKB ID Q9HYC1_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
Tli5
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 4.17
Kyte-Doolittle Hydrophobicity Value -0.570
Molecular Weight (kDa) 26.6
Isoelectric Point (pI) 9.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002155 (82 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3488
Search term: tli5
Search term: Tli5

References

Diverse type VI secretion phospholipases are functionally plastic antibacterial effectors.
Russell AB, LeRoux M, Hathazi K, Agnello DM, Ishikawa T, Wiggins PA, Wai SN, Mougous JD
Nature 2013 Apr;496(7446):508-12
PubMed ID: 23552891
PubMed ID: 28673999
PubMed ID: 27376031