Pseudomonas aeruginosa PAO1, PA5096

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5096
Name
Replicon chromosome
Genomic location 5737346 - 5738314 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_253783.1
GI 15600289
Affymetrix PA5096_at
DNASU PaCD00008192
Entrez 879515
GenBank AAG08481.1
INSDC AAG08481.1
NCBI Locus Tag PA5096
protein_id(GenBank) gb|AAG08481.1|AE004922_6|gnl|PseudoCAP|PA5096
TIGR NTL03PA05097
UniParc UPI00000C5EFC
UniProtKB Acc Q9HU87
UniProtKB ID Q9HU87_PSEAE
UniRef100 UniRef100_Q9HU87
UniRef50 UniRef50_Q4KJN6
UniRef90 UniRef90_Q9HU87

Product

Feature Type CDS
Coding Frame 1
Product Name
probable binding protein component of ABC transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -5.42
Kyte-Doolittle Hydrophobicity Value -0.215
Molecular Weight (kDa) 35.5
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 129 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004693 (460 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5096

References

No references are associated with this feature.