Pseudomonas aeruginosa UCBPP-PA14, PA14_00940 (tssK1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00940
Name
tssK1
Replicon chromosome
Genomic location 94052 - 95386 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 8 transposon mutants in orthologs

Cross-References

RefSeq YP_788235.1
GI 116053798
Entrez 4380424
INSDC ABJ15034.1
NCBI Locus Tag PA14_00940
UniParc UPI00000C4F20
UniProtKB Acc Q02V01
UniProtKB ID Q02V01_PSEAB
UniRef100 UniRef100_Q9I753
UniRef50 UniRef50_Q4K3P2
UniRef90 UniRef90_Q9I753

Product

Feature Type CDS
Coding Frame 1
Product Name
TssK1
Product Name Confidence: Class 1
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)
Evidence for Translation
Charge (pH 7) -6.92
Kyte-Doolittle Hydrophobicity Value -0.021
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 6.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000078 (894 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00940
Search term: tssK1
Search term: TssK1

References

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999