Pseudomonas aeruginosa UCBPP-PA14, PA14_18960 (tli5a)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_18960
Name
tli5a
Synonym: type VI secretion lipase immunity Tli5
Synonym: tli5
Replicon chromosome
Genomic location 1634535 - 1635233 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789659.1
GI 116051505
Entrez 4381471
INSDC ABJ12741.1
NCBI Locus Tag PA14_18960
UniParc UPI00000C5A36
UniProtKB Acc Q02QX7
UniProtKB ID Q02QX7_PSEAB
UniRef100 UniRef100_Q9HYC1
UniRef50 UniRef50_Q9HYC1
UniRef90 UniRef90_Q9HYC1

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion lipase immunity Tli5A
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 4.17
Kyte-Doolittle Hydrophobicity Value -0.570
Molecular Weight (kDa) 26.6
Isoelectric Point (pI) 9.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002155 (82 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_18960
Search term: tli5a

References

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999
The T6SSs of Pseudomonas aeruginosa Strain PAO1 and Their Effectors: Beyond Bacterial-Cell Targeting.
Sana TG, Berni B, Bleves S.
Front Cell Infect Microbiol. 2016 Jun 9;6:61.
PubMed ID: 27376031