Pseudomonas aeruginosa UCBPP-PA14, PA14_43020 (hsiF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_43020
Name
hsiF2
Synonym: tssE2
Replicon chromosome
Genomic location 3827167 - 3827574 (- strand)
Transposon Mutants in orthologs 5 transposon mutants in orthologs
CommentHcp Secretion Island-II-encoded type VI secretion system (H2-T6SS)

Cross-References

RefSeq YP_791587.1
GI 116049608
Entrez 4382921
INSDC ABJ10844.1
NCBI Locus Tag PA14_43020
UniParc UPI00003967E7
UniProtKB Acc Q02KE9
UniProtKB ID Q02KE9_PSEAB
UniRef100 UniRef100_Q02KE9
UniRef50 UniRef50_Q9I366
UniRef90 UniRef90_Q9I366

Product

Feature Type CDS
Coding Frame 1
Product Name
HsiF2
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) -1.56
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 14.7
Isoelectric Point (pI) 5.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 48 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000086 (851 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_43020
Search term: hsiF2
Search term: HsiF2

References

Structure-function analysis of HsiF, a gp25-like component of the type VI secretion system, in Pseudomonas aeruginosa.
Lossi NS, Dajani R, Freemont P, Filloux A.
Microbiology. 2011 Dec;157(Pt 12):3292-305.
PubMed ID: 21873404
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999