Pseudomonas putida KT2440, PP_3097 (tssF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas putida KT2440 (TIGR)
GCF_000007565.2|latest
Locus Tag
PP_3097
Name
tssF1
Replicon chromosome
Genomic location 3492382 - 3494202 (- strand)
CommentPart of the K1-T6SS KT2440-Type VI secretion system

Cross-References

RefSeq NP_745241.1
GI 26989816

Product

Feature Type CDS
Coding Frame 1
Product Name
TssF1
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7)
Kyte-Doolittle Hydrophobicity Value -0.217
Molecular Weight (kDa) 69.2
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP_3097
Search term: tssF1
Search term: TssF1

Human Homologs

References

The Pseudomonas putida T6SS is a plant warden against phytopathogens.
Bernal P, Allsopp LP, Filloux A, Llamas MA
ISME J 2017 Apr;11(4):972-987
PubMed ID: 28045455