Pseudomonas aeruginosa PAO1, PA1678

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA1678
Name
Synonym: ycfB
Replicon chromosome
Genomic location 1827992 - 1828906 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_250369.1
GI 15596875
Affymetrix PA1678_at
Entrez 878096
GenBank AAG05067.1
INSDC AAG05067.1
NCBI Locus Tag PA1678
protein_id(GenBank) gb|AAG05067.1|AE004595_6|gnl|PseudoCAP|PA1678
TIGR NTL03PA01679
UniParc UPI000013AFEB
UniProtKB Acc Q9I347
UniProtKB ID PRMB_PSEAE
UniRef100 UniRef100_Q9I347
UniRef50 UniRef50_P39199
UniRef90 UniRef90_Q9I347

Product

Feature Type CDS
Coding Frame 1
Product Name
probable DNA methylase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -26.30
Kyte-Doolittle Hydrophobicity Value -0.090
Molecular Weight (kDa) 34.2
Isoelectric Point (pI) 4.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003712 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1678

Human Homologs

References

No references are associated with this feature.