Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1687
|
Name |
speE
|
Replicon | chromosome |
Genomic location | 1836367 - 1837227 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_250378.1 |
GI | 15596884 |
Affymetrix | PA1687_speE_at |
DNASU | PaCD00006765 |
Entrez | 883061 |
GenBank | AAG05076.1 |
INSDC | AAG05076.1 |
NCBI Locus Tag | PA1687 |
protein_id(GenBank) | gb|AAG05076.1|AE004596_2|gnl|PseudoCAP|PA1687 |
TIGR | NTL03PA01688 |
UniParc | UPI0000135DEF |
UniProtKB Acc | Q9X6R0 |
UniProtKB ID | SPEE1_PSEAE |
UniRef100 | UniRef100_Q9X6R0 |
UniRef50 | UniRef50_Q9X6R0 |
UniRef90 | UniRef90_Q9X6R0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
spermidine synthase
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -12.44 |
Kyte-Doolittle Hydrophobicity Value | -0.239 |
Molecular Weight (kDa) | 32.2 |
Isoelectric Point (pI) | 4.93 |
Individual Mappings | |
Additional evidence for subcellular localization |
Detetected in a periplasmic protein preparation by spheroplasting by osmotic shock.(PMID:19333994)
|
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 351 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003702 (713 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1687
Search term: speE
Search term: spermidine synthase
|
Ensembl
110, assembly
GRCh38.p14
|
spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
E-value:
1.5e-53
Percent Identity:
37.5
|
Spermidine synthase of Escherichia coli: localization of the speE gene.
Tabor CW, Tabor H, Xie QW
Proc Natl Acad Sci U S A 1986 Aug;83(16):6040-4
PubMed ID: 3526348
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|