Pseudomonas aeruginosa PAO1, PA1792

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA1792
Name	Synonym: ybbF
Replicon	chromosome
Genomic location	1941720 - 1942442 (- strand)

Cross-References

RefSeq	NP_250483.1
GI	15596989
Affymetrix	PA1792_at
DNASU	PaCD00006816
Entrez	878790
GenBank	AAG05181.1
INSDC	AAG05181.1
NCBI Locus Tag	PA1792
protein_id(GenBank)	gb|AAG05181.1|AE004605_3|gnl|PseudoCAP|PA1792
TIGR	NTL03PA01793
UniParc	UPI000012E913
UniProtKB Acc	Q9I2V0
UniProtKB ID	LPXH_PSEAE
UniRef100	UniRef100_B7VB87
UniRef50	UniRef50_Q88IU7
UniRef90	UniRef90_B7VB87

Product

Feature Type	CDS
Coding Frame	1
Product Name	conserved hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7)	3.55
Kyte-Doolittle Hydrophobicity Value	-0.331
Molecular Weight (kDa)	27.6
Isoelectric Point (pI)	8.15

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
5B4B	HYDROLASE	04/03/16	Crystal structure of LpxH with lipid X in spacegroup C2	Pseudomonas aeruginosa PAO1	1.6	X-RAY DIFFRACTION	100.0
5B49	HYDROLASE	04/03/16	Crystal structure of LpxH with manganese from Pseudomonas aeruginosa	Pseudomonas aeruginosa PAO1	1.65	X-RAY DIFFRACTION	100.0
5B4A	HYDROLASE	04/03/16	Crystal structure of LpxH with lipid X in spacegroup P21	Pseudomonas aeruginosa PAO1	1.72	X-RAY DIFFRACTION	100.0
5B4D	HYDROLASE	04/03/16	Crystal structure of H10N mutant of LpxH	Pseudomonas aeruginosa PAO1	1.75	X-RAY DIFFRACTION	99.6
5B4C	HYDROLASE	04/03/16	Crystal structure of H10N mutant of LpxH with manganese	Pseudomonas aeruginosa PAO1	1.96	X-RAY DIFFRACTION	99.6

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 204 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003606 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA1792

Human Homologs

References