Pseudomonas aeruginosa PAO1, PA3490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3490
Name
Synonym: rnfB
Replicon chromosome
Genomic location 3907849 - 3908415 (+ strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252180.1
GI 15598686
Affymetrix PA3490_at
DNASU PaCD00007534
Entrez 879986
GenBank AAG06878.1
INSDC AAG06878.1
NCBI Locus Tag PA3490
protein_id(GenBank) gb|AAG06878.1|AE004770_3|gnl|PseudoCAP|PA3490
TIGR NTL03PA03490
UniParc UPI0000134388
UniProtKB Acc Q9HYB9
UniProtKB ID ETCB_PSEAE
UniRef100 UniRef100_B7UWJ3
UniRef50 UniRef50_B5F6I9
UniRef90 UniRef90_Q02QX9

Product

Feature Type CDS
Coding Frame 1
Product Name
probable ferredoxin
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -9.95
Kyte-Doolittle Hydrophobicity Value 0.081
Molecular Weight (kDa) 20.0
Isoelectric Point (pI) 4.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 261 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000430 (922 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3490

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
The complete genome sequence of Escherichia coli K-12.
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y
Science 1997 Sep 5;277(5331):1453-62
PubMed ID: 9278503
Overexpression in Escherichia coli of the rnf genes from Rhodobacter capsulatus--characterization of two membrane-bound iron-sulfur proteins.
Jouanneau Y, Jeong HS, Hugo N, Meyer C, Willison JC
Eur J Biochem 1998 Jan 15;251(1-2):54-64
PubMed ID: 9492268