Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3828
|
Name |
lptF
Synonym: yjgP |
Replicon | chromosome |
Genomic location | 4285477 - 4286595 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252517.1 |
GI | 15599023 |
Affymetrix | PA3828_at |
Entrez | 879878 |
GenBank | AAG07215.1 |
INSDC | AAG07215.1 |
NCBI Locus Tag | PA3828 |
protein_id(GenBank) | gb|AAG07215.1|AE004800_4|gnl|PseudoCAP|PA3828 |
TIGR | NTL03PA03828 |
UniParc | UPI00000C5B2D |
UniProtKB Acc | Q9HXH4 |
UniProtKB ID | Q9HXH4_PSEAE |
UniRef100 | UniRef100_W0YXK5 |
UniRef50 | UniRef50_Q4KHT5 |
UniRef90 | UniRef90_A6V0T3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Lipopolysaccharide export system permease protein LptF
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (41.33 kDa, PMID:21751344)
|
Charge (pH 7) | 7.71 |
Kyte-Doolittle Hydrophobicity Value | 0.331 |
Molecular Weight (kDa) | 41.3 |
Isoelectric Point (pI) | 9.77 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5X5Y | MEMBRANE PROTEIN | 02/18/17 | A membrane protein complex | Pseudomonas aeruginosa PAO1 | 3.465 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 254 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001837 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3828
Search term: lptF
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Proc Natl Acad Sci U S A 2008 Apr 8;105(14):5537-42
PubMed ID: 18375759
|