Pseudomonas aeruginosa PAO1, PA3938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3938
Name
Synonym: tauA
Replicon chromosome
Genomic location 4415796 - 4416809 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252627.1
GI 15599133
Affymetrix PA3938_at
DNASU PaCD00007719
Entrez 878806
GenBank AAG07325.1
INSDC AAG07325.1
NCBI Locus Tag PA3938
protein_id(GenBank) gb|AAG07325.1|AE004811_8|gnl|PseudoCAP|PA3938
TIGR NTL03PA03938
UniParc UPI00000C5B87
UniProtKB Acc Q9HX78
UniProtKB ID Q9HX78_PSEAE
UniRef100 UniRef100_S0ISN4
UniRef50 UniRef50_Q4KK15
UniRef90 UniRef90_A6V0G9

Product

Feature Type CDS
Coding Frame 1
Product Name
probable periplasmic taurine-binding protein precursor
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.21
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 7.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 223 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001738 (866 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3938

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Identification of sulfate starvation-regulated genes in Escherichia coli: a gene cluster involved in the utilization of taurine as a sulfur source.
van der Ploeg JR, Weiss MA, Saller E, Nashimoto H, Saito N, Kertesz MA, Leisinger T
J Bacteriol 1996 Sep;178(18):5438-46
PubMed ID: 8808933