Pseudomonas aeruginosa PAO1, PA4388

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4388
Name
Replicon chromosome
Genomic location 4918199 - 4918933 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253078.1
GI 15599584
Affymetrix PA4388_at
Entrez 881335
GenBank AAG07776.1
INSDC AAG07776.1
NCBI Locus Tag PA4388
protein_id(GenBank) gb|AAG07776.1|AE004854_12|gnl|PseudoCAP|PA4388
TIGR NTL03PA04389
UniParc UPI00000C5CF5
UniProtKB Acc Q9HW16
UniProtKB ID Q9HW16_PSEAE
UniRef100 UniRef100_W0YYP6
UniRef50 UniRef50_G8Q6W3
UniRef90 UniRef90_A6VB60

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.21
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 27.0
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2ARZ UNKNOWN FUNCTION 08/22/05 Crystal Structure of Protein of Unknown Function from Pseudomonas aeruginosa Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 85 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003979 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4388

Human Homologs

References

No references are associated with this feature.