Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4455
|
Name |
Synonym: yrbE |
Replicon | chromosome |
Genomic location | 4987285 - 4988082 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_253145.1 |
GI | 15599651 |
Affymetrix | PA4455_at |
DNASU | PaCD00007931 |
Entrez | 881008 |
GenBank | AAG07843.1 |
INSDC | AAG07843.1 |
NCBI Locus Tag | PA4455 |
protein_id(GenBank) | gb|AAG07843.1|AE004859_12|gnl|PseudoCAP|PA4455 |
TIGR | NTL03PA04456 |
UniParc | UPI00000C5D1A |
UniProtKB Acc | Q9HVW2 |
UniProtKB ID | Q9HVW2_PSEAE |
UniRef100 | UniRef100_A0A072ZEI7 |
UniRef50 | UniRef50_F6FXV9 |
UniRef90 | UniRef90_A0A072ZEI7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable permease of ABC transporter
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (28.38 kDa, PMID:21751344)
|
Charge (pH 7) | 0.44 |
Kyte-Doolittle Hydrophobicity Value | 0.762 |
Molecular Weight (kDa) | 28.4 |
Isoelectric Point (pI) | 7.50 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7CH8 | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.9 | ELECTRON MICROSCOPY | 100.0 |
7CH9 | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.5 | ELECTRON MICROSCOPY | 100.0 |
7CHA | MEMBRANE PROTEIN | 07/05/20 | Cryo-EM structure of P.aeruginosa MlaFEBD with AMPPNP | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); Pseudomonas aeruginosa PAO1 | 3.9 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004044 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4455
Search term: probable permease of ABC transporter
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|
A Putative ABC Transporter Permease Is Necessary for Resistance to Acidified Nitrite and EDTA in Pseudomonas aeruginosa under Aerobic and Anaerobic Planktonic and Biofilm Conditions.
McDaniel C, Su S, Panmanee W, Lau GW, Browne T, Cox K, Paul AT, Ko SH, Mortensen JE, Lam JS, Muruve DA, Hassett DJ
Front Microbiol 2016;7:291
PubMed ID: 27064218
|