Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4519
|
Name |
speC
|
Replicon | chromosome |
Genomic location | 5060115 - 5061278 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_253209.1 |
GI | 15599715 |
Affymetrix | PA4519_at |
Entrez | 881118 |
GenBank | AAG07907.1 |
INSDC | AAG07907.1 |
NCBI Locus Tag | PA4519 |
protein_id(GenBank) | gb|AAG07907.1|AE004866_1|gnl|PseudoCAP|PA4519 |
TIGR | NTL03PA04520 |
UniParc | UPI00000C5D4E |
UniProtKB Acc | Q9HVQ3 |
UniProtKB ID | Q9HVQ3_PSEAE |
UniRef100 | UniRef100_W0Z6P4 |
UniRef50 | UniRef50_Q4KID4 |
UniRef90 | UniRef90_L8MFV0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ornithine decarboxylase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -11.60 |
Kyte-Doolittle Hydrophobicity Value | -0.151 |
Molecular Weight (kDa) | 43.6 |
Isoelectric Point (pI) | 4.69 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004100 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4519
Search term: speC
Search term: ornithine decarboxylase
|
Identification of the putrescine biosynthetic genes in Pseudomonas aeruginosa and characterization of agmatine deiminase and N-carbamoylputrescine amidohydrolase of the arginine decarboxylase pathway.
Nakada Y, Itoh Y
Microbiology (Reading) 2003 Mar;149(Pt 3):707-714
PubMed ID: 12634339
|
The gene and the primary structure of ornithine decarboxylase from Saccharomyces cerevisiae.
Fonzi WA, Sypherd PS
J Biol Chem 1987 Jul 25;262(21):10127-33
PubMed ID: 3038869
|
Novel characteristics of Selenomonas ruminantium lysine decarboxylase capable of decarboxylating both L-lysine and L-ornithine.
Takatsuka Y, Onoda M, Sugiyama T, Muramoto K, Tomita T, Kamio Y
Biosci Biotechnol Biochem 1999 Jun;63(6):1063-9
PubMed ID: 10427692
|