Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4890
|
Name |
desT
Synonym: desT Synonym: yijC |
Replicon | chromosome |
Genomic location | 5486356 - 5486985 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | DesT negatively regulates both desB (PA4888) and PA4889 |
RefSeq | NP_253577.1 |
GI | 15600083 |
Affymetrix | PA4890_at |
Entrez | 882265 |
GenBank | AAG08275.1 |
INSDC | AAG08275.1 |
NCBI Locus Tag | PA4890 |
protein_id(GenBank) | gb|AAG08275.1|AE004902_3|gnl|PseudoCAP|PA4890 |
TIGR | NTL03PA04891 |
UniParc | UPI00000C5E60 |
UniProtKB Acc | Q9HUS3 |
UniProtKB ID | Q9HUS3_PSEAE |
UniRef100 | UniRef100_W0Z0X0 |
UniRef50 | UniRef50_Q4KJ31 |
UniRef90 | UniRef90_W0Z0X0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DesT
|
Synonyms |
DesT |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 2.92 |
Kyte-Doolittle Hydrophobicity Value | 0.024 |
Molecular Weight (kDa) | 22.9 |
Isoelectric Point (pI) | 9.07 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
3LSJ | TRANSCRIPTION | 02/12/10 | Crystal structure of DesT in complex with palmitoyl-CoA | Pseudomonas aeruginosa | 2.3 | X-RAY DIFFRACTION | 99.5 |
3LSR | TRANSCRIPTION/DNA | 02/12/10 | Crystal structure of DesT in complex with duplex DNA | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 2.55 | X-RAY DIFFRACTION | 99.5 |
3LSP | TRANSCRIPTION/DNA | 02/12/10 | Crystal Structure of DesT bound to desCB promoter and oleoyl-CoA | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 2.66 | X-RAY DIFFRACTION | 99.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 92 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004514 (507 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4890
Search term: desT
Search term: DesT
|
Two aerobic pathways for the formation of unsaturated fatty acids in Pseudomonas aeruginosa.
Zhu K, Choi KH, Schweizer HP, Rock CO, Zhang YM
Mol Microbiol 2006 Apr;60(2):260-73
PubMed ID: 16573679
|