Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4907
|
Name |
Synonym: ydfG |
Replicon | chromosome |
Genomic location | 5505848 - 5506609 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_253594.1 |
GI | 15600100 |
Affymetrix | PA4907_at |
Entrez | 878002 |
GenBank | AAG08292.1 |
INSDC | AAG08292.1 |
NCBI Locus Tag | PA4907 |
protein_id(GenBank) | gb|AAG08292.1|AE004903_10|gnl|PseudoCAP|PA4907 |
TIGR | NTL03PA04908 |
UniParc | UPI00000C5E71 |
UniProtKB Acc | Q9HUQ6 |
UniProtKB ID | Q9HUQ6_PSEAE |
UniRef100 | UniRef100_W0YU19 |
UniRef50 | UniRef50_Q1R183 |
UniRef90 | UniRef90_W0YU19 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable short-chain dehydrogenase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -5.92 |
Kyte-Doolittle Hydrophobicity Value | -0.047 |
Molecular Weight (kDa) | 27.4 |
Isoelectric Point (pI) | 5.10 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2NWQ | OXIDOREDUCTASE | 11/16/06 | Short chain dehydrogenase from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.3 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004527 (533 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4907
Search term: probable short-chain dehydrogenase
|
Ensembl
110, assembly
GRCh38.p14
|
retinol dehydrogenase 16 [Source:HGNC Symbol;Acc:HGNC:29674]
E-value:
3.8e-16
Percent Identity:
35.4
|