Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4936
|
Name |
Synonym: spoU Synonym: yjfH |
Replicon | chromosome |
Genomic location | 5537953 - 5538699 (- strand) |
Transposon Mutants | 10 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_253623.1 |
GI | 15600129 |
Affymetrix | PA4936_at |
Entrez | 877647 |
GenBank | AAG08321.1 |
INSDC | AAG08321.1 |
NCBI Locus Tag | PA4936 |
protein_id(GenBank) | gb|AAG08321.1|AE004906_9|gnl|PseudoCAP|PA4936 |
TIGR | NTL03PA04937 |
UniParc | UPI00000C5E85 |
UniProtKB Acc | Q9HUM8 |
UniProtKB ID | RLMB_PSEAE |
UniRef100 | UniRef100_Q9HUM8 |
UniRef50 | UniRef50_Q8ZIV4 |
UniRef90 | UniRef90_Q9HUM8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable rRNA methylase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 0.56 |
Kyte-Doolittle Hydrophobicity Value | -0.053 |
Molecular Weight (kDa) | 27.1 |
Isoelectric Point (pI) | 7.18 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004551 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4936
Search term: probable rRNA methylase
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
E-value:
5.1e-21
Percent Identity:
32.1
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
E-value:
5.1e-21
Percent Identity:
32.1
|
The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 2'-O-methyltransferase activity.
Persson BC, Jäger G, Gustafsson C
Nucleic Acids Res 1997 Oct 15;25(20):4093-7
PubMed ID: 9321663
|