Pseudomonas aeruginosa PAO1, PA5104

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5104
Name
Replicon chromosome
Genomic location 5748013 - 5748603 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_253791.1
GI 15600297
Affymetrix PA5104_at
DNASU PaCD00008194
Entrez 883033
GenBank AAG08489.1
INSDC AAG08489.1
NCBI Locus Tag PA5104
protein_id(GenBank) gb|AAG08489.1|AE004923_5|gnl|PseudoCAP|PA5104
TIGR NTL03PA05105
UniParc UPI00000C5F02
UniProtKB Acc Q9HU79
UniProtKB ID Q9HU79_PSEAE
UniRef100 UniRef100_Q9HU79
UniRef50 UniRef50_P24696
UniRef90 UniRef90_Q9HU79

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.68
Kyte-Doolittle Hydrophobicity Value -0.182
Molecular Weight (kDa) 21.4
Isoelectric Point (pI) 5.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1YLL STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01/19/05 Crystal Structure of the Conserved Protein of Unknown Function PA5104 from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa 1.64 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 72 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004700 (488 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5104

Human Homologs

References

Nucleotide sequence of the gene encoding the repressor for the histidine utilization genes of Pseudomonas putida.
Allison SL, Phillips AT
J Bacteriol 1990 Sep;172(9):5470-6
PubMed ID: 2203753