Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5198
|
Name |
Synonym: ldcA |
Replicon | chromosome |
Genomic location | 5850239 - 5851162 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_253885.1 |
GI | 15600391 |
Affymetrix | PA5198_at |
DNASU | PaCD00008238 |
Entrez | 880289 |
GenBank | AAG08583.1 |
INSDC | AAG08583.1 |
NCBI Locus Tag | PA5198 |
protein_id(GenBank) | gb|AAG08583.1|AE004932_10|gnl|PseudoCAP|PA5198 |
TIGR | NTL03PA05199 |
UniParc | UPI00000C5F4C |
UniProtKB Acc | Q9HTZ1 |
UniProtKB ID | LDC_PSEAE |
UniRef100 | UniRef100_Q9HTZ1 |
UniRef50 | UniRef50_Q9HTZ1 |
UniRef90 | UniRef90_Q9HTZ1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
LD-carboxypeptidase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.55 |
Kyte-Doolittle Hydrophobicity Value | -0.059 |
Molecular Weight (kDa) | 33.3 |
Isoelectric Point (pI) | 6.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
1ZRS | HYDROLASE | 05/21/05 | wild-type LD-carboxypeptidase | Pseudomonas aeruginosa | 1.5 | X-RAY DIFFRACTION | 99.3 |
1ZL0 | STRUCTURAL GENOMICS, UNKNOWN FUNCTION | 05/04/05 | Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.1 | X-RAY DIFFRACTION | 100.0 |
2AUN | HYDROLASE | 08/28/05 | Active site His285Ala mutant of LD-carboxypeptidase | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 99.0 |
2AUM | HYDROLASE | 08/28/05 | Active site Ser115Ala mutant of LD-carboxypeptidase | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 99.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 265 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004782 (372 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5198
Search term: LD-carboxypeptidase
|
Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow.
Korza HJ, Bochtler M
J Biol Chem 2005 Dec 9;280(49):40802-12
PubMed ID: 16162494
|
A defect in cell wall recycling triggers autolysis during the stationary growth phase of Escherichia coli.
Templin MF, Ursinus A, Höltje JV
EMBO J 1999 Aug 2;18(15):4108-17
PubMed ID: 10428950
|