Pseudomonas aeruginosa PAO1, PA5237

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5237
Name
Synonym: yigC
Replicon chromosome
Genomic location 5895261 - 5896727 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_253924.1
GI 15600430
Affymetrix PA5237_at
Entrez 880853
GenBank AAG08622.1
INSDC AAG08622.1
NCBI Locus Tag PA5237
protein_id(GenBank) gb|AAG08622.1|AE004936_5|gnl|PseudoCAP|PA5237
TIGR NTL03PA05238
UniParc UPI0000137995
UniProtKB Acc Q9HTV3
UniProtKB ID UBID_PSEAE
UniRef100 UniRef100_B7V5C7
UniRef50 UniRef50_Q9KV48
UniRef90 UniRef90_Q4ZZP7

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -2.24
Kyte-Doolittle Hydrophobicity Value -0.265
Molecular Weight (kDa) 54.6
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 377 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004817 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5237

Human Homologs

References

No references are associated with this feature.