Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5539
|
Name |
|
Replicon | chromosome |
Genomic location | 6231662 - 6232558 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Deaminates 2-aminoacrylate in vitro |
RefSeq | NP_254226.1 |
GI | 15600732 |
Affymetrix | PA5539_at |
DNASU | PaCD00008385 |
Entrez | 877616 |
GenBank | AAG08924.1 |
INSDC | AAG08924.1 |
NCBI Locus Tag | PA5539 |
protein_id(GenBank) | gb|AAG08924.1|AE004966_6|gnl|PseudoCAP|PA5539 |
TIGR | NTL03PA05540 |
UniParc | UPI00000C6061 |
UniProtKB Acc | Q9HT35 |
UniProtKB ID | GCH4_PSEAE |
UniRef100 | UniRef100_B7V776 |
UniRef50 | UniRef50_Q4K3E8 |
UniRef90 | UniRef90_B7V776 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RidA subfamily protein
|
Synonyms |
2-aminoacrylate deaminase |
Evidence for Translation | |
Charge (pH 7) | -5.50 |
Kyte-Doolittle Hydrophobicity Value | -0.067 |
Molecular Weight (kDa) | 32.4 |
Isoelectric Point (pI) | 6.12 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 113 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005072 (501 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5539
Search term: RidA subfamily protein
|
Members of the Rid protein family have broad imine deaminase activity and can accelerate the Pseudomonas aeruginosa D-arginine dehydrogenase (DauA) reaction in vitro.
Hodge-Hanson KM, Downs DM
PLoS One 2017;12(9):e0185544
PubMed ID: 28957411
|
PA5339, a RidA Homolog, Is Required for Full Growth in Pseudomonas aeruginosa.
Irons J, Hodge-Hanson KM, Downs DM
J Bacteriol 2018 Nov 15;200(22)
PubMed ID: 30181125
|