Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5553
|
Name |
atpC
Synonym: papG Synonym: uncC |
Replicon | chromosome |
Genomic location | 6247811 - 6248236 (- strand) |
RefSeq | NP_254240.1 |
GI | 15600746 |
Affymetrix | PA5553_atpC_at |
DNASU | PaCD00007314 |
Entrez | 878082 |
GenBank | AAG08938.1 |
INSDC | AAG08938.1 |
NCBI Locus Tag | PA5553 |
protein_id(GenBank) | gb|AAG08938.1|AE004967_9|gnl|PseudoCAP|PA5553 |
TIGR | NTL03PA05554 |
UniParc | UPI000012650A |
UniProtKB Acc | Q9HT21 |
UniProtKB ID | ATPE_PSEAE |
UniRef100 | UniRef100_A6VF31 |
UniRef50 | UniRef50_P41171 |
UniRef90 | UniRef90_A6VF31 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ATP synthase epsilon chain
|
Synonyms | |
Evidence for Translation |
Detected using LC-MS/MS (14.73 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -4.32 |
Kyte-Doolittle Hydrophobicity Value | 0.158 |
Molecular Weight (kDa) | 14.7 |
Isoelectric Point (pI) | 4.93 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 484 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005084 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5553
Search term: atpC
Search term: ATP synthase epsilon chain
|
The atp operon: nucleotide sequence of the genes for the gamma, beta, and epsilon subunits of Escherichia coli ATP synthase.
Saraste M, Gay NJ, Eberle A, Runswick MJ, Walker JE
Nucleic Acids Res 1981 Oct 24;9(20):5287-96
PubMed ID: 6272217
|
Solution structure of the epsilon subunit of the F1-ATPase from Escherichia coli and interactions of this subunit with beta subunits in the complex.
Wilkens S, Capaldi RA
J Biol Chem 1998 Oct 9;273(41):26645-51
PubMed ID: 9756905
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|