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               PA0629               
Key to diagram


View in GBrowse: (?) 15 putative orthologs View metabolic pathways using PseudoCyc Acknowledgements for this annotation
Gene Information
Strain Pseudomonas aeruginosa PAO1 (Tax ID: 208964) Replicon Chromosome(5651 genes, 6264404 bp) [ RefSeq ]
Gene name   Alternate Gene Names
Locus tag PA0629 (View 3 updates) GenBank Identifier (GI) 15595826 (Precomputed BLAST results at BLINK )
Genomic location 687979 - 688608 (+) Feature type CDS 
Transposon Mutant Available?Transposon mutant library help Yes (View in GBrowse) Pseudomonas Ortholog Group Explanation of Orthologous Groups
POG000612 
Orthology uncertain because more than one top BLASTp hit was identified.
Product Information
Product Name conserved hypothetical protein (Class 4  Explanation of Product Name Confidence)
Alternate Product Names
Subcellular localization
Unknown (Class 3Explanation of Localization Confidence)
Function Classification / Gene Ontology (GO)
PseudoCAP Function Class Related to phage, transposon, or plasmid
Homology
BLINK Precomputed BLAST results at BLINK
Homologs Explanation of Homologs Field 56% similar to hypothetical protein HI1415 [Haemophilus influenzae Rd]
Structure Features
PFAM predictions Explanation of PFAM predictions
Accession Domain Start Stop E-value Release No.
PF00182 Glyco_hydro_19, Chitinase class I. 29 191 3e-09 23.0
 
Operons/Regulons
Type operon
Genes
GeneProduct
PA0628 conserved hypothetical protein
PA0629 conserved hypothetical protein
PA0630 hypothetical protein
PA0631 hypothetical protein
PA0632 hypothetical protein
Evidence Computationally Predicted
PubMed 18988623
Cross-Reference DOOR-13244
Microarray Expression Data
NCBI GEO Link
Sequence data
Upstream 500 BP Region CGACAGAGCGGGCAGAGCGCCACGGGGCGTCGGATCGAACCTTTGGTGTTGGGACGTGCTGACGTCGGTAGCTTCGACGTTACCTTCGACGACCGCAGCC TGATGAGAACGGTGAAGACCCGCTACCAATTGCCCGGCAGCGGCGAGGTCAAGAGCGTCGAGTTGAAGAACCCGAAGGCACCGGCTACGGCTATGGGCGA GCATGTCGACCGGCACCTCTATACCAGCCGTGGAGAGGCCGAGCAGGCGGCGAAGGCTCGCCTGGCGAGCTTCAGCCGCTCCAGCGCCAGTGTGCGCCTG GAACTGCCAGGGCGTGGCGACCTGTTCGCCGAGCGCAGCCTGCTGCTCCAAGGCTTCAAGGCGGGAATCGACGGCGAGTTCCTGATCGACTCGGTGGAGC ACACCTACAGCTCCAGCGGATGGACCACTGTCGTGCAATGCAACGGCGGCCGAGGCGGCAAGGGGTGACGCCTGAAACCCATCGGAGTGCAGGAGGATCG

BLAST search against this genome or other genomes in database
Need more than 500 BP? Try our sequence retrieval tool or view intergenic regions in GBrowse.

DNA Sequence ATGAAACTGACCGAGCAGCAATTGCTGCGCATTTTTCCCAACGCCCGCCTCGTCGCGGGCGTTTTCGTTGTGGCGTTGCAACGGGCCATGGACGAGAGGG AGATCGACACACCGGCGCGGCGTGCCGCGTTTCTCGCCCAGGTCGGCCACGAAAGCAGCCAGTTGACCCGGCTGGTGGAGAACCTCAATTACAGCGCCCA AGGCTTGGCGGCGACCTGGCCGGGTCGCTATCTCGGCCCCGACGGGCAGCCCAACGCGTTGGCCTTGCGGCTGGCGCGCAATCCGCAGGCGATTGCCGAC AACACCTACGCCACGCGCAACGGCAATGGCGACGAAGCGTCCGGCGATGGCTGGCGCTTCCGCGGGCGTGGCTTGCTACAAATCACCGGGCGTGCCAACT ACCGGTTGGTCGGCGAGGCCCTCGGCGAGCCGCTGGAAGCCGAGCCCTGGCGCCTGGAGCAGCCCGTGCCGGCGGCCCGCAGCGCCGCCTGGTGGTGGGC CGGTCACGGGCTCAACGAGCTGGCCGACCGCGGCGAGTTCGCTGCCATCACCCGCCGCATTAACGGCGGCCTGAATGGCCAGGCGGAGCGCCTGGCGTTG TGGCAGCGGGCCAGGGCGGTGCTGTCATGA

BLAST search against this genome or other genomes in database


Downstream 500 BP region Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence MKLTEQQLLRIFPNARLVAGVFVVALQRAMDEREIDTPARRAAFLAQVGHESSQLTRLVENLNYSAQGLAATWPGRYLGPDGQPNALALRLARNPQAIAD NTYATRNGNGDEASGDGWRFRGRGLLQITGRANYRLVGEALGEPLEAEPWRLEQPVPAARSAAWWWAGHGLNELADRGEFAAITRRINGGLNGQAERLAL WQRARAVLS

BLAST search against this genome or other genomes in database
View precomputed BLAST results against all genomes at NCBI BLINK
References
PubMed  
Alternate Annotations and Cross-References
TIGR NTL03PA00630
Systomonas PA0629
RefSeq NP_249320.1
GI 15595826
KEGG PA0629
GBrowse Click here for a GBrowse View of this and other annotations.
PseudoCyc Click here to view metabolic pathways in PseudoCyc.


We thank Cystic Fibrosis Foundation Therapeutics, Inc. for critical funding support for the Pseudomonas Genome Database. When acknowledging use of the database, please cite the article by Winsor et al. (2009; PMID:18978025) and not the web site URL. Thank you!

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