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               PA2783               
Key to diagram


View in GBrowse: (?) 6 putative orthologs View metabolic pathways using PseudoCyc Acknowledgements for this annotation
Gene Information
Strain Pseudomonas aeruginosa PAO1 (Tax ID: 208964) Replicon Chromosome(5651 genes, 6264404 bp) [ RefSeq ]
Gene name   Alternate Gene Names
Locus tag PA2783 (View 7 updates) GenBank Identifier (GI) 15597979 (Precomputed BLAST results at BLINK )
Genomic location 3139748 - 3141547 (+) Feature type CDS 
Transposon Mutant Available?Transposon mutant library help Yes (View in GBrowse) Pseudomonas Ortholog Group Explanation of Orthologous Groups
Product Information
Product Name hypothetical protein (Class 4  Explanation of Product Name Confidence)
Alternate Product Names
Subcellular localization
Periplasmic (Class 3Explanation of Localization Confidence)
Function Classification / Gene Ontology (GO)
PseudoCAP Function Class Hypothetical, unclassified, unknown
Homology
BLINK Precomputed BLAST results at BLINK
Structure Features
Structure Features Explanation of Structure Features Field type I export signal computationally predicted by LipoP v.1.0 (cleavage after residue 20)
type I export signal computationally predicted by Phobius (cleavage after residue 20)
type I export signal computationally predicted by SignalP v.3.0 Hidden Markov Models (cleavage after residue 20)
Export across inner membrane confirmed by PhoA fusion screen
PFAM predictions Explanation of PFAM predictions
Accession Domain Start Stop E-value Release No.
PF02018 CBM_4_9, Carbohydrate binding domain. 458 599 2e-06 23.0
 
Operons/Regulons
Type operon
Genes
GeneProduct
PA2782 hypothetical protein
PA2783 hypothetical protein
Evidence Computationally Predicted
PubMed 18988623
Cross-Reference DOOR-13681
Microarray Expression Data
NCBI GEO Link
Sequence data
Upstream 500 BP Region CAAGGCGAACTGCGCAGCCGCGAAGGCGCCCAGGGCATTCCCGAATACCTGGCGCAGGTCGAACCCGCCCTGCTCGACACGCTGGCGCTCGGCCAGGTGC TGGAAATGAGCCTGCCGGGTCGCGAGCGGCCCTTGCAGGCACGCCTCGCCAGCACCCATAACAGCGCCGGCCTGCCGGTCTGGCGCGGCGGCCTGGTGGA CGGCGACGAGGCGGAAAGCCTGACCGTGGTGCGCGGCAGCCTGGAAACCCACATCAATGTCGCCACCCTCGACGGCAGCTACTCGATCATCGTCGACAAC CGCAGCGGCAAGACCCGGGTGATCGACGAGAACGACATCGCCGCGCGTAGCGACCCGCACGGCGATCATGTCGACGCGCCGCTCGCCGAGCTGCCACCGA TGCCGCCGCCCGCCCAGGGCTGAGCCCACCTTCCCAGCATGTTTCCCCAGCGGTGCCCTCGGGGCGCCATGGCTTCCTATTGTCCGAACACAGGCAACCC

BLAST search against this genome or other genomes in database
Need more than 500 BP? Try our sequence retrieval tool or view intergenic regions in GBrowse.

DNA Sequence ATGAAGAAATCCCTGCTCTGCTCCACCCTAGCCCTGGCGGTAGCCTCTGCCGCCCAGGCCGCGCCGAAGACCGTCGACATCATGGTCCTCTACACCCCCG CGGCGACCCAGACCGCAAATGGCCGCGACATCGATGCGCGGATCGCCAGCTACATCGAGTTCGCCAACACCGCCTACGAGAAGAGCGGCGTCAACCTGCG CCTGCGTCTGGTGCACAAGCAGCGCCTGGACTGGGCCGACTACCCGACGGTGACCGGCGCCAACCTCGATCGCTTCATGCGCGACCCGCAGGTGCAGCGC CTGCGCGAGCAGTACGGCGCCGACCTGGTCAGCCTGGTCAACCGCTCGCAGAACAGCGGCAACGGCTACATCACCTGCGGCATCGGCTACATGGGCTCGG GCGATAAGAACAGCGGGCGCTTCCACGGCAACGCCAAGGACATTGCCTACAACCTCACCGGGGTCGACTGCGGGCTCAACACCTTCGCCCATGAAGCCGG CCACAACATGGGCCTGCGCCACTCCTACGAGCAGGACCTGGAGTCCAGCTACTACGATCCGCGCTACGCCCACAGCGGCACCTACGAATGGAGCCGCGGC TACGGCGTGCAGGGGCGCTTCGCCACCGTGATGGCCTACCCGCATGCCTTCGGCACCAACAAGCAGGCACCGTTCTTCGCCAACCCGCGCCTGGTCAACG CCGAATGCGCCAACCAGCCCTGCGGCCGCGAAGAACACGCCGACGCCGTACGCGCGCTGAACAGCATGGCCACGCAGATCGCCGACTTTCGCCCGACCAA GGTACCCGGCACGGTCAACCCGGGCTCCGGCGGCGACACGCCGACCCCGCCGGACCTGCCATGGTGCACGAAAGCCAAGCTCGGCGGCCTGCTCGGCGAT GGCGAGTTCGCCAGCATGGAAGGCTGGCGCGCATGGTCCGGCAACGCCCAACTGAGCCTGGTGAACGTCGCCAAGGGCTGCCGCGACAATGCCTTGCTGG TCGACGTGCGTGGCTTCGACCTGCTGGTCCGCCCCATTGCCCCCCTGCGCGCCGGCAGCGGCTACCGGCTGAGCGGCAAGGTCATGCTCAAGGCCGCGAA TACCCGTGAAACCGTGCGCATGGCGCTGCTCAGCGAACGCGCCGATGGCGCCCTGGCCTACAACCCGGCGCAGAGCGTCGAACTGTCGGTCAGCGGCAAC GAGTTCAGTCGCCTGGAGAAGACCTTCGACTACCGTCCCGCCGCCGACCAGCGCAACCTCTACGTGGCGGTCTGGAGCGACAGCGGCGCCAGCCTGCTGG TCGACGAGATGAACCTGCAGGAAGCCCAGGCCGCGCCGCCGAGCGTACCGCCGGCGCCGAAACGCATCGCCTACGACTTCGAGAGCGGCATCGGCGGCTG GAGCGGCGTGCATGCCAGCGCCCGCGCCACGCGCGTCGCCAGCGCCGGGCGGCTGGCCCTGGAAGCCTACCAGCGGCGCTACGCCGGCACCGGCGCGAGC ACCAGCCTGCTGGGCAACCTGGAAGCAGGCCGGACCTACGCGTTCAGCGCGGACGTACGGGTCGGCGACGGTCGCGGCTCGCAGGCCATGACCTATGCCT ACCTCTACCTGGAAAGCCAGGGTCGGCCCGGCGAATACCTGCCCCTGGGCTACAAGGTGGTCGAGAATGGCCGCTGGGCCAGCCTGCGCGGCCAGGTGCA ATTGCCGAAGGGGCCGATCAAGCGTGCTGAACTGATGATCCTCAGCGGTAACCAGCAGGAGTCGATGTTCATCGACAACGTCCAGTTGCTGCAGAAGTAG

BLAST search against this genome or other genomes in database


Downstream 500 BP region Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence MKKSLLCSTLALAVASAAQAAPKTVDIMVLYTPAATQTANGRDIDARIASYIEFANTAYEKSGVNLRLRLVHKQRLDWADYPTVTGANLDRFMRDPQVQR LREQYGADLVSLVNRSQNSGNGYITCGIGYMGSGDKNSGRFHGNAKDIAYNLTGVDCGLNTFAHEAGHNMGLRHSYEQDLESSYYDPRYAHSGTYEWSRG YGVQGRFATVMAYPHAFGTNKQAPFFANPRLVNAECANQPCGREEHADAVRALNSMATQIADFRPTKVPGTVNPGSGGDTPTPPDLPWCTKAKLGGLLGD GEFASMEGWRAWSGNAQLSLVNVAKGCRDNALLVDVRGFDLLVRPIAPLRAGSGYRLSGKVMLKAANTRETVRMALLSERADGALAYNPAQSVELSVSGN EFSRLEKTFDYRPAADQRNLYVAVWSDSGASLLVDEMNLQEAQAAPPSVPPAPKRIAYDFESGIGGWSGVHASARATRVASAGRLALEAYQRRYAGTGAS TSLLGNLEAGRTYAFSADVRVGDGRGSQAMTYAYLYLESQGRPGEYLPLGYKVVENGRWASLRGQVQLPKGPIKRAELMILSGNQQESMFIDNVQLLQK

BLAST search against this genome or other genomes in database
View precomputed BLAST results against all genomes at NCBI BLINK
References
PubMed Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE.
Genome Res. 2005 Feb;15(2):321-9.
PMID: 15687295
 
Alternate Annotations and Cross-References
TIGR NTL03PA02783
Systomonas PA2783
RefSeq NP_251473.1
GI 15597979
KEGG PA2783
GBrowse Click here for a GBrowse View of this and other annotations.
PseudoCyc Click here to view metabolic pathways in PseudoCyc.


We thank Cystic Fibrosis Foundation Therapeutics, Inc. for critical funding support for the Pseudomonas Genome Database. When acknowledging use of the database, please cite the article by Winsor et al. (2009; PMID:18978025) and not the web site URL. Thank you!

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