Motif View

Internal ID 1571896
Source Database CollecTF A cross-reference and link to the record at CollecTF is not available yet. (CollecTF website)
Feature Type motif
Name
AmpR binding site
Sequence CCTGCGCGAAAAGT
Look for more occurrences
Start 1921029
End 1921042
Strand +
Genomic Context Located within gene sigX
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000314
direct assay evidence used in manual assertion
ChIP-Seq,ChIP-PCR,RNA-Seq,qPCR [quantitative real-time]
Additional Comments

Reference

Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response.
Balasubramanian D, Kumari H, Jaric M, Fernandez M, Turner KH, Dove SL, Narasimhan G, Lory S, Mathee K
Nucleic Acids Res 2014 Jan;42(2):979-98
PubMed ID: 24157832