Internal ID | 1571896 | Source Database | CollecTF A cross-reference and link to the record at CollecTF is not available yet. (CollecTF website) |
Feature Type | motif |
Name |
AmpR binding site
|
Sequence |
CCTGCGCGAAAAGT Look for more occurrences |
Start | 1921029 |
End | 1921042 |
Strand | + |
Genomic Context | Located within gene sigX |
Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
Evidence |
ECO:0000314
direct assay evidence used in manual assertion
ChIP-Seq,ChIP-PCR,RNA-Seq,qPCR [quantitative real-time]
|
Additional Comments |
Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response.
Balasubramanian D, Kumari H, Jaric M, Fernandez M, Turner KH, Dove SL, Narasimhan G, Lory S, Mathee K
Nucleic Acids Res 2014 Jan;42(2):979-98
PubMed ID: 24157832
|