Motif View

Internal ID 17656121
Source Database TransTermHP TERM 807
Feature Type terminator
Name
Rho-independent transcription terminator TERM 807
Sequence CCCGGCTTCGGCCGGG
Look for more occurrences
Start 3570906
End 3570921
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACGGCATAAAAAAA(5' tail) CCCGGC(5' stem) CGAA(loop) GCCGGG(3' stem) CATGCCCAGGCGGGC(3' tail). Confidence: 100. opp_overlap 3570917

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685