Pseudomonas Genome Database - Search a Genome Annotation

You may use this search function to search the continually updated PAO1 database by annotation and/or sequence and then compare selected annotations. Additionally, you may wish to search the log file describing all database updates. By default, wild cards are enabled for all searches.
Note: Hint for improving your search results

Browse annotations by function classification or subcellular localization

Advanced Boolean search of updated annotations

Please select from one or more of these genomes: (required)

Pseudomonas aeruginosa PAO1 ^M	Pseudomonas putida KT2440
Pseudomonas aeruginosa PA14 ^M	Pseudomonas putida F1
Pseudomonas aeruginosa PA7	Pseudomonas stutzeri A1501
Pseudomonas entomophila L48	Pseudomonas syringae B728a
Pseudomonas fluorescens Pf-5	Pseudomonas syringae DC3000
Pseudomonas fluorescens PfO-1	Pseudomonas syringae phaseolicola 1448A
Pseudomonas mendocina ymp
^M Transposon mutant library data and filtering function available.

We discourage searches of the original Pseudomonas aeruginosa PAO1 annotation since it is not updated, however, if you wish to search it you can find it here: Pseudomonas aeruginosa PAO1 (Sep2000)

Filter transposon mutants
Filter human homologs?

Specify search fields and keywords:

			Exact
			Exact
			Exact
			Exact

Combined Search of both Pseudomonas and Burkholderia Genome Databases

Go to BLAST search of genomic DNA or protein sequences

Search hint: We also recommend, as a complement to searching the annotations, that you search, using BLAST, for homologs to a protein of interest, to find additional genes/proteins of interest that may have annotations that don't show up in your annotation search (i.e. if you want all homologs of a particular membrane protein, but the particular membrane protein has been named differently by different Pseudomonas Genome Projects). From a BLAST search you can also select genes/proteins of interest for further study, and compare them using the Compare feature with other genes/proteins you hold on your clipboard.

Search the database

Advanced Boolean search of updated annotations

Go to BLAST search of genomic DNA or protein sequences