Strain Overview | |
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Organism Name | Pseudomonas aeruginosa ATCC 27853 - Assembly GCF_001086625.1 |
Species | Pseudomonas aeruginosa |
Strain | ATCC 27853 |
Description/Title | Pseudomonas aeruginosa ATCC |
Annotated Genes | |
Partial Genes | 1 |
Host Information | |
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Host Species Taxonomic Name | Homo sapiens |
Host Species Common Name | human |
Host Species Taxonomy ID | 9606 |
Host Species Disease | Not Collected |
Geographic Location | |
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Location Name | USA: Rochester, Minnesota |
Isolation Source | Associated Infection |
Latitude/Longitude | 44.0234 N 92.4630 W |
Sample Provider | |
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Name | Daniel OBrien |
obrien.daniel@mayo.edu | |
Institution | The Mayo Clinic |
Date Collected | 13-Apr-2014 |
Database | Scheme | Sequence Type | Alleles | |||||||
---|---|---|---|---|---|---|---|---|---|---|
PubMLST | paeruginosa | 155 |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | 21 |
Contig N50 | 2097247 |
Assembly Level | Contig |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN03787331 |
NCBI Taxonomy ID | 287 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Feature | Count |
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pseudo | 1 |
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |