Pseudomonas aeruginosa PAO1, PA0176

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009454 aerotaxis
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
14987771 Reviewed by curator
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004888 transmembrane signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Chemotaxis ECO:0000037
not_recorded
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Chemotactic transducer (MCP) ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 513 542 4.1E-56
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 633 1.2E-90
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 353 634 6.28E-74
FunFam G3DSA:1.20.120.1530:FF:000009 Aerotaxis transducer Aer2 - - 1 156 6.8E-105
CDD cd17529 HAMP_I - - 11 55 2.40664E-10
Coils Coil Coil - - 41 68 -
Gene3D G3DSA:1.10.287.950 - - - 336 635 1.1E-79
Gene3D G3DSA:3.30.450.20 PAS domain - - 170 289 9.5E-43
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 3.3E-54
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 561 590 4.1E-56
CDD cd17528 HAMP_III - - 112 155 4.54732E-16
CDD cd11386 MCP_signal - - 413 604 4.45469E-57
FunFam G3DSA:3.30.450.20:FF:000075 Methyl-accepting chemotaxis protein - - 170 289 8.1E-57
FunFam G3DSA:1.10.287.950:FF:000002 Methyl-accepting chemotaxis protein - - 411 636 9.2E-120
MobiDBLite mobidb-lite consensus disorder prediction - - 405 425 -
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 167 275 8.38E-6
Pfam PF18947 HAMP domain IPR003660 HAMP domain 318 379 7.8E-8
PANTHER PTHR43531 PROTEIN ICFG - - 289 662 1.3E-130
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 484 511 4.1E-56
Gene3D G3DSA:1.20.120.1530 - - - 1 156 3.0E-41
Pfam PF13188 PAS domain IPR000014 PAS domain 173 221 2.0E-5
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 407 436 4.1E-56
Coils Coil Coil - - 409 429 -
MobiDBLite mobidb-lite consensus disorder prediction - - 644 679 -
Pfam PF18575 HAMP N-terminal domain 3 IPR041395 HAMP N-terminal domain 3 114 156 4.5E-18
Coils Coil Coil - - 590 617 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.