Pseudomonas aeruginosa PAO1, PA0439

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01037
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01037
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.70
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01037
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein IPR005720 Dihydroorotate dehydrogenase domain 5 320 6.0E-50
CDD cd02940 DHPD_FMN 4 302 0.0
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 374 404 9.676
CDD cd03110 SIMIBI_bact_arch 338 416 6.1185E-8
Pfam PF01180 Dihydroorotate dehydrogenase IPR005720 Dihydroorotate dehydrogenase domain 5 306 1.2E-27
SUPERFAMILY SSF51395 2 320 5.0E-76
ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site 383 394 -
Pfam PF14697 4Fe-4S dicluster domain 339 401 3.3E-22
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 5 311 1.4E-99
SUPERFAMILY SSF54862 318 402 3.52E-13
Gene3D G3DSA:3.30.70.20 318 415 1.2E-23
ProSiteProfiles PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain 337 366 8.374

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.