Pseudomonas aeruginosa PAO1, PA0445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004803 transposase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006313 transposition, DNA-mediated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Related to phage, transposon, or plasmid Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02371 Transposase IS116/IS110/IS902 family IPR003346 Transposase IS116/IS110/IS902, C-terminal 213 294 1.2E-24
Coils Coil Coil - - 181 208 -
Pfam PF01548 Transposase IPR002525 Transposase IS110-like, N-terminal 6 145 1.2E-14
NCBIfam NF033542 NCBIFAM: IS110 family transposase IPR047650 Transposase IS110-like 6 332 2.0E-109
PANTHER PTHR33055 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A IPR047650 Transposase IS110-like 5 326 1.0E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.