Pseudomonas aeruginosa PAO1, PA0501 (bioF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008710 8-amino-7-oxononanoate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01693
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009102 biotin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01693
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc 8-amino-7-oxononanoate biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCyc BIOTIN-SYNTHESIS-II-PWY biotin biosynthesis II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Biotin metabolism ECO:0000037
not_recorded
MetaCyc 8-amino-7-oxononanoate biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00780 Biotin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 8-amino-7-oxononanoate biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 55 284 0.0
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 6 385 1.2E-109
PANTHER PTHR13693 CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE - - 22 378 2.7E-95
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 39 376 0.0
NCBIfam TIGR00858 JCVI: 8-amino-7-oxononanoate synthase IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type 17 378 0.0
Pfam PF00155 Aminotransferase class I and II IPR004839 Aminotransferase, class I/classII 39 378 2.6E-52
Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria 1 382 51.239311
CDD cd06454 KBL_like - - 37 382 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.