Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009405 | pathogenesis | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
15385461 | Reviewed by curator |
Molecular Function | GO:0052381 | tRNA dimethylallyltransferase activity | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Biological Process | GO:0015968 | stringent response | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
15385461 | Reviewed by curator |
Biological Process | GO:0050896 | response to stimulus | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Biological Process | GO:0015969 | guanosine tetraphosphate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF04607
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCyc | PPGPPMET-PWY | ppGpp biosynthesis | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF13291 | ACT domain | IPR002912 | ACT domain | 666 | 743 | 1.0E-18 |
CDD | cd05399 | NT_Rel-Spo_like | IPR007685 | RelA/SpoT | 238 | 360 | 1.4441E-37 |
Gene3D | G3DSA:3.30.460.10 | Beta Polymerase, domain 2 | IPR043519 | Nucleotidyltransferase superfamily | 219 | 352 | 4.8E-49 |
Pfam | PF04607 | Region found in RelA / SpoT proteins | IPR007685 | RelA/SpoT | 262 | 370 | 8.4E-38 |
Pfam | PF02824 | TGS domain | IPR004095 | TGS | 416 | 475 | 1.4E-21 |
Gene3D | G3DSA:3.10.20.30 | - | IPR012675 | Beta-grasp domain superfamily | 409 | 483 | 1.5E-31 |
SUPERFAMILY | SSF81301 | Nucleotidyltransferase | IPR043519 | Nucleotidyltransferase superfamily | 207 | 420 | 2.62E-63 |
SUPERFAMILY | SSF55021 | ACT-like | IPR045865 | ACT-like domain | 667 | 743 | 5.0E-15 |
Gene3D | G3DSA:3.30.70.260 | - | - | - | 666 | 746 | 2.2E-18 |
NCBIfam | TIGR00691 | JCVI: RelA/SpoT family protein | IPR004811 | RelA/SpoT family | 69 | 742 | 0.0 |
Pfam | PF19296 | RelA/SpoT, AH and RIS domains | IPR045600 | RelA/SpoT, AH and RIS domains | 493 | 638 | 1.9E-6 |
SMART | SM00954 | RelA_SpoT_2 | IPR007685 | RelA/SpoT | 262 | 372 | 3.9E-66 |
CDD | cd01668 | TGS_RSH | IPR033655 | RelA/SpoT, TGS domain | 417 | 475 | 6.22135E-34 |
Pfam | PF13328 | HD domain | - | - | 40 | 202 | 3.3E-45 |
SUPERFAMILY | SSF81271 | TGS-like | IPR012676 | TGS-like | 407 | 475 | 5.01E-22 |
FunFam | G3DSA:1.10.3210.10:FF:000033 | GTP pyrophosphokinase | - | - | 11 | 218 | 0.0 |
Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 11 | 218 | 9.3E-45 |
FunFam | G3DSA:3.10.20.30:FF:000002 | GTP pyrophosphokinase (RelA/SpoT) | - | - | 409 | 482 | 1.0E-31 |
SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 18 | 218 | 1.79E-49 |
FunFam | G3DSA:3.30.70.260:FF:000075 | GTP pyrophosphokinase | - | - | 666 | 746 | 1.8E-52 |
PANTHER | PTHR21262 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE | - | - | 18 | 743 | 0.0 |
CDD | cd04876 | ACT_RelA-SpoT | - | - | 672 | 743 | 1.88064E-21 |
FunFam | G3DSA:3.30.460.10:FF:000001 | GTP pyrophosphokinase RelA | - | - | 219 | 352 | 6.7E-59 |