Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 25 | 36 | 4.8E-5 |
CDD | cd05466 | PBP2_LTTR_substrate | - | - | 115 | 290 | 5.4318E-22 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 8 | 93 | 1.31E-19 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 108 | 297 | 8.9E-20 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 10 | 69 | 2.0E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 36 | 46 | 4.8E-5 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 7 | 296 | 5.9E-58 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 85 | 3.1E-22 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 46 | 57 | 4.8E-5 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 96 | 294 | 8.2E-35 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 98 | 295 | 3.15E-31 |