Pseudomonas aeruginosa PAO1, PA1150 (pys2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019835 cytolysis
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 8491711 Reviewed by curator
Molecular Function GO:0004519 endonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.540.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009617 response to bacterium
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019835 cytolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005102 signaling receptor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 283 303 -
Coils Coil Coil - - 242 262 -
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 314 335 0.0
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 341 361 0.0
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 551 570 0.0
SMART SM00507 HNH_5 IPR003615 HNH nuclease 627 682 1.2E-6
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 667 686 0.0
CDD cd00085 HNHc IPR003615 HNH nuclease 648 685 1.07732E-7
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 606 625 0.0
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 584 605 0.0
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 448 466 0.0
SUPERFAMILY SSF69369 Cloacin translocation domain IPR036302 Pyosin/cloacin translocation domain superfamily 322 584 2.22E-56
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 362 380 0.0
Coils Coil Coil - - 169 203 -
SUPERFAMILY SSF54060 His-Me finger endonucleases IPR044925 His-Me finger superfamily 555 685 1.59E-53
Pfam PF06958 S-type Pyocin IPR016128 Pyosin/cloacin translocation domain 415 554 2.4E-35
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 397 420 0.0
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 629 646 0.0
Gene3D G3DSA:3.90.540.10 Colicin/pyocin, DNase domain IPR037146 Colicin/pyocin, DNase domain superfamily 556 689 2.5E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.