Pseudomonas aeruginosa PAO1, PA1777 (oprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006810 transport
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Molecular Function GO:0001851 complement component C3b binding
Interaction partner: UniProtKB:P01024
IPI
Inferred from Physical Interaction
ECO:0000076
far-Western blotting evidence
25964476 Reviewed by curator
Cellular Component GO:0019867 outer membrane
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
2836364 Reviewed by curator
Biological Process GO:0044406 adhesion of symbiont to host
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
21189321 Reviewed by curator
Molecular Function GO:0015288 porin activity
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
2836364 Reviewed by curator
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF103647
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 274 289 7.4E-18
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 45 188 6.54E-17
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 289 305 7.4E-18
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 235 345 3.27E-39
SUPERFAMILY SSF103647 TSP type-3 repeat IPR028974 TSP type-3 repeat 198 232 4.84E-7
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 244 266 7.4E-18
Gene3D G3DSA:2.40.160.20 - - - 14 184 2.7E-55
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 222 342 1.9E-33
FunFam G3DSA:3.30.1330.60:FF:000005 Outer membrane porin F - - 229 347 1.4E-56
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 244 339 7.8E-24
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 229 350 2.0E-41
Pfam PF05736 OprF membrane domain IPR008722 Outer membrane porin F, N-terminal 1 188 2.4E-97
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 239 345 1.09411E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.