Pseudomonas aeruginosa PAO1, PA3186 (oprB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008643 carbohydrate transport
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
7768797 Reviewed by curator
Biological Process GO:0006810 transport
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04966
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008643 carbohydrate transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04966
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04966
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04966 Carbohydrate-selective porin, OprB family IPR007049 Carbohydrate-selective porin OprB 80 454 1.8E-119
Gene3D G3DSA:2.40.160.180 - IPR038673 Carbohydrate-selective porin OprB superfamily 36 454 0.0
FunFam G3DSA:2.40.160.180:FF:000004 Porin - - 36 454 0.0
PANTHER PTHR37944 PORIN B - - 2 454 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.