Pseudomonas aeruginosa PAO1, PA3820 (secF)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0046903	secretion	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	8112309	Reviewed by curator
Molecular Function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00966	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006886	intracellular protein transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00966	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03060	Protein export	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30081	PROTEIN-EXPORT MEMBRANE PROTEIN SEC	IPR022813	Protein-export membrane protein SecD/SecF, archaeal and bacterial	9	286	7.3E-65
Pfam	PF02355	Protein export membrane protein	IPR022813	Protein-export membrane protein SecD/SecF, archaeal and bacterial	111	287	4.8E-64
SUPERFAMILY	SSF82866	Multidrug efflux transporter AcrB transmembrane domain	-	-	70	286	4.32E-38
PRINTS	PR01755	Bacterial translocase SecF protein signature	IPR022645	Protein-export membrane protein SecD/SecF, bacterial	227	242	2.6E-32
NCBIfam	TIGR00916	JCVI: SecD/SecF family protein translocase subunit	IPR022645	Protein-export membrane protein SecD/SecF, bacterial	92	276	4.7E-54
NCBIfam	TIGR00966	JCVI: protein translocase subunit SecF	IPR005665	Protein-export membrane protein SecF, bacterial	8	286	2.5E-94
FunFam	G3DSA:1.20.1640.10:FF:000006	Protein-export membrane protein SecF	-	-	96	298	1.6E-89
PRINTS	PR01755	Bacterial translocase SecF protein signature	IPR022645	Protein-export membrane protein SecD/SecF, bacterial	147	161	2.6E-32
PRINTS	PR01755	Bacterial translocase SecF protein signature	IPR022645	Protein-export membrane protein SecD/SecF, bacterial	35	50	2.6E-32
Pfam	PF07549	SecD/SecF GG Motif	IPR022646	Protein-export membrane protein SecD/SecF/SecDF, conserved site	31	57	2.4E-12
Hamap	MF_01464_B	Protein-export membrane protein SecF [secF].	IPR005665	Protein-export membrane protein SecF, bacterial	8	290	28.185711
PRINTS	PR01755	Bacterial translocase SecF protein signature	IPR022645	Protein-export membrane protein SecD/SecF, bacterial	195	213	2.6E-32
Gene3D	G3DSA:1.20.1640.10	Multidrug efflux transporter AcrB transmembrane domain	-	-	96	292	1.2E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.