Pseudomonas aeruginosa PAO1, PA4624 (cdrB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0044010	single-species biofilm formation	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	20088866	Reviewed by curator
Cellular Component	GO:0098046	type V protein secretion system complex	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:P35077	ECO:0000250 sequence similarity evidence used in manual assertion	20088866	Reviewed by curator
Molecular Function	GO:0008320	protein transmembrane transporter activity	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	20088866	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-partner secretion system		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.10.20.310	membrane protein fhac	-	-	59	146	2.3E-19
Pfam	PF08479	POTRA domain, ShlB-type	IPR013686	Polypeptide-transport-associated, ShlB-type	71	146	1.7E-21
Pfam	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB	IPR005565	Haemolysin activator HlyB, C-terminal	208	528	3.3E-21
PANTHER	PTHR34597	SLR1661 PROTEIN	-	-	1	568	0.0
Gene3D	G3DSA:2.40.160.50	membrane protein fhac: a member of the omp85/tpsb transporter family	-	-	186	568	2.9E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.