Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4996
|
Name |
rfaE
|
Replicon | chromosome |
Genomic location | 5612268 - 5613692 (- strand) |
RefSeq | NP_253683.1 |
GI | 15600189 |
Affymetrix | PA4996_rfaE_at |
Entrez | 881680 |
GenBank | AAG08381.1 |
INSDC | AAG08381.1 |
NCBI Locus Tag | PA4996 |
protein_id(GenBank) | gb|AAG08381.1|AE004912_7|gnl|PseudoCAP|PA4996 |
TIGR | NTL03PA04997 |
UniParc | UPI00000C5EB9 |
UniProtKB Acc | Q9HUG9 |
UniProtKB ID | HLDE_PSEAE |
UniRef100 | UniRef100_Q9HUG9 |
UniRef50 | UniRef50_Q7AAQ7 |
UniRef90 | UniRef90_Q9HUG9 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
LPS biosynthesis protein RfaE
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -4.63 |
Kyte-Doolittle Hydrophobicity Value | 0.082 |
Molecular Weight (kDa) | 50.3 |
Isoelectric Point (pI) | 6.20 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 463 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004606 (537 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4996
Search term: rfaE
Search term: LPS biosynthesis protein RfaE
|
The rfaE gene from Escherichia coli encodes a bifunctional protein involved in biosynthesis of the lipopolysaccharide core precursor ADP-L-glycero-D-manno-heptose.
Valvano MA, Marolda CL, Bittner M, Glaskin-Clay M, Simon TL, Klena JD
J Bacteriol 2000 Jan;182(2):488-97
PubMed ID: 10629197
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|