Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5554
|
Name |
atpD
Synonym: papB Synonym: uncD |
Replicon | chromosome |
Genomic location | 6248278 - 6249654 (- strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
RefSeq | NP_254241.1 |
GI | 15600747 |
Affymetrix | PA5554_atpD_at |
Entrez | 878083 |
GenBank | AAG08939.1 |
INSDC | AAG08939.1 |
NCBI Locus Tag | PA5554 |
protein_id(GenBank) | gb|AAG08939.1|AE004967_10|gnl|PseudoCAP|PA5554 |
TIGR | NTL03PA05555 |
UniParc | UPI00000C606E |
UniProtKB Acc | Q9HT20 |
UniProtKB ID | ATPB_PSEAE |
UniRef100 | UniRef100_A6VF32 |
UniRef50 | UniRef50_P50002 |
UniRef90 | UniRef90_Q87TT4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ATP synthase beta chain
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Detected using LC-MS/MS (49.50 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -14.57 |
Kyte-Doolittle Hydrophobicity Value | -0.061 |
Molecular Weight (kDa) | 49.5 |
Isoelectric Point (pI) | 4.73 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005085 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5554
Search term: atpD
Search term: ATP synthase beta chain
|
Ensembl
110, assembly
GRCh38.p14
|
ATP synthase F1 subunit beta [Source:HGNC Symbol;Acc:HGNC:830]
E-value:
4.4e-180
Percent Identity:
70.6
|
The atp operon: nucleotide sequence of the genes for the gamma, beta, and epsilon subunits of Escherichia coli ATP synthase.
Saraste M, Gay NJ, Eberle A, Runswick MJ, Walker JE
Nucleic Acids Res 1981 Oct 24;9(20):5287-96
PubMed ID: 6272217
|
Mutations in Ser174 and the glycine-rich sequence (Gly149, Gly150, and Thr156) in the beta subunit of Escherichia coli H(+)-ATPase.
Iwamoto A, Omote H, Hanada H, Tomioka N, Itai A, Maeda M, Futai M
J Biol Chem 1991 Sep 5;266(25):16350-5
PubMed ID: 1832155
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|