Pseudomonas fluorescens Pf0-1, Pfl01_0088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11804
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004222 metalloendopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11804
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008237 metallopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.390.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR11804 PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED IPR045090 Peptidase M3A/M3B 20 664 2.6E-113
Gene3D G3DSA:3.40.390.10 Collagenase (Catalytic Domain) IPR024079 Metallopeptidase, catalytic domain superfamily 361 510 3.1E-116
SUPERFAMILY SSF55486 Metalloproteases ("zincins"), catalytic domain - - 4 665 1.88E-116
Pfam PF01432 Peptidase family M3 IPR001567 Peptidase M3A/M3B catalytic domain 226 665 1.5E-76
Gene3D G3DSA:1.10.1370.10 Neurolysin, domain 3 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 151 665 3.1E-116

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.