Pseudomonas fluorescens Pf0-1, Pfl01_2234

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_2234
Name
Replicon	chromosome
Genomic location	2563983 - 2564747 (- strand)

Cross-References

RefSeq	YP_347966.1
GI	77458461
Entrez	3715653
INSDC	ABA73977.1
NCBI Locus Tag	Pfl01_2234
UniParc	UPI0000388116
UniProtKB Acc	Q3KE29
UniProtKB ID	Q3KE29_PSEPF
UniRef100	UniRef100_Q3KE29
UniRef50	UniRef50_W6V6D7
UniRef90	UniRef90_W6V6D7

Product

Feature Type	CDS
Coding Frame	1
Product Name	Short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7)	0.65
Kyte-Doolittle Hydrophobicity Value	0.159
Molecular Weight (kDa)	26659.3
Isoelectric Point (pI)	7.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015432 (55 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_2234 Search term: Short-chain dehydrogenase/reductase SDR

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000518355 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 7.0e-18 Percent Identity: 31.3
Ensembl 110, assembly GRCh38.p14	ENSP00000326219 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 7.0e-18 Percent Identity: 31.3

References