Pseudomonas fluorescens Pf0-1, Pfl01_2242

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015293 symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF118215 Proton glutamate symport protein IPR036458 Sodium:dicarboxylate symporter superfamily 6 403 3.01E-112
PANTHER PTHR42865 PROTON/GLUTAMATE-ASPARTATE SYMPORTER IPR001991 Sodium:dicarboxylate symporter 5 413 3.2E-93
PRINTS PR00173 Glutamate-aspartate symporter signature - - 4 24 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 146 168 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 329 348 3.9E-47
Pfam PF00375 Sodium:dicarboxylate symporter family IPR001991 Sodium:dicarboxylate symporter 6 402 1.7E-111
Gene3D G3DSA:1.10.3860.10 Sodium:dicarboxylate symporter IPR036458 Sodium:dicarboxylate symporter superfamily 1 406 3.6E-115
PRINTS PR00173 Glutamate-aspartate symporter signature - - 356 376 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 79 104 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 294 320 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 194 213 3.9E-47
FunFam G3DSA:1.10.3860.10:FF:000001 C4-dicarboxylate transport protein - - 1 407 0.0
PRINTS PR00173 Glutamate-aspartate symporter signature - - 49 69 3.9E-47
PRINTS PR00173 Glutamate-aspartate symporter signature - - 219 238 3.9E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.