Pseudomonas fluorescens Pf0-1, Pfl01_2646

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 608 720 3.3E-38
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1041 1153 4.02004E-40
CDD cd00156 REC - - 774 871 1.17138E-19
SMART SM00065 gaf_1 IPR003018 GAF domain 253 397 7.2E-10
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 773 879 1.4E-16
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 893 1020 8.54E-18
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 608 718 1.9E-28
CDD cd00156 REC - - 896 995 2.79042E-13
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 479 562 1.24E-20
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 770 886 6.69E-27
Gene3D G3DSA:3.40.50.2300 - - - 773 889 2.2E-25
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 560 722 4.4E-47
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1037 1159 2.13E-38
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 663 673 8.5E-16
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 613 717 2.1702E-50
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 645 659 8.5E-16
CDD cd19410 HK9-like_sensor - - 49 170 5.38382E-36
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 893 1007 1.9E-9
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 895 996 2.5E-13
SUPERFAMILY SSF55781 GAF domain-like - - 243 415 5.61E-22
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 561 3.0E-15
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 557 3.2615E-13
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 680 698 8.5E-16
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 225 399 2.4E-21
Coils Coil Coil - - 389 490 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 550 721 2.49E-45
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 560 722 1.6E-46
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 307 949 0.0
Pfam PF13185 GAF domain IPR003018 GAF domain 257 388 1.9E-15
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 493 561 8.5E-19
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1041 1153 7.9E-28
Gene3D G3DSA:1.10.287.130 - - - 458 559 2.3E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 704 717 8.5E-16
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 46 178 2.0E-38
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 771 881 4.9E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1039 1153 1.2E-38
Coils Coil Coil - - 874 894 -
Gene3D G3DSA:3.40.50.2300 - - - 890 1038 2.2E-17
Gene3D G3DSA:3.40.50.2300 - - - 1039 1162 1.9E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.