Pseudomonas fluorescens Pf0-1, Pfl01_3778 (codB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015209 cytosine transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30569
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd11484 SLC-NCS1sbd_CobB-like - - 15 406 2.82353E-87
Gene3D G3DSA:1.10.4160.10 Hydantoin permease - - 9 418 1.4E-51
PANTHER PTHR30569 CYTOSINE TRANSPORTER CODB IPR030191 Cytosine permease 1 411 7.3E-71
Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IPR001248 Purine-cytosine permease 15 412 1.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.